This Genetic Ancestry Scoping Review Search_readme.txt file was generated on 20240712 by Travis Nace ------------------- GENERAL INFORMATION ------------------- 1. Title of Dataset: Genetic ancestry and its implications for the cancer continuum in populations of African ancestry Scoping Review Search Strategy 2. Author Information: Principal Investigator Contact Information Name: Rob Kulathinal, PhD Institution: Temple University, College of Science and Technology, Department of Biology Address: 1900 North 12th Street Philadelphia, PA 19122 Email: robkulathinal@temple.edu ORCID: n/a Associate or Co-investigator Contact Information Name: Samuel Boudeau, PhD graduate student Institution: Temple University, College of Science and Technology, Department of Biology Address: 1900 North 12th Street Philadelphia, PA 19122 Email: samboudeau@temple.edu ORCID: n/a Associate or Co-investigator Contact Information Name: Albert Doughan, PhD graduate student Institution: Temple University, College of Science and Technology, Department of Biology Address: 1900 North 12th Street Philadelphia, PA 19122 Email: albertdoughan@temple.edu ORCID: n/a Associate or Co-investigator Contact Information Name: Tanisha Maitre, PhD graduate student Institution: Temple University, College of Science and Technology, Department of Biology Address: 1900 North 12th Street Philadelphia, PA 19122 Email: tanishamaitre@temple.edu ORCID: n/a Librarian Co-Author Contact Information Name: Travis Nace, MSLIS Institution: Temple University Libraries Address: Ginsburg Library 3400 N. Broad Street, Philadelphia, PA 19140 Email: travis.nace@temple.edu ORCID: https://orcid.org/0000-0002-1547-7288 3. Date of data collection (single date, range, approximate date): 20240522 4. Geographic location of data collection (change default if needed): Ginsburg Health Sciences Library, Temple University, 3500 N. Broad St. Philadelphia, PA 19140 5. Information about funding sources or sponsorship that supported the collection of the data: N/A -------------------------- SHARING/ACCESS INFORMATION -------------------------- 1. Licenses/restrictions placed on the data, or limitations of reuse (If they don稚 decide on a license, we can place an embargo up until they know): Creative Commons CC-BY-NC-SA License 2. Recommended citation for the data: Nace, T., Kulathinal, R., Boudeau, S., et al. Search Strategies for a scoping review of genetic ancestry and its implications for the cancer continuum in populations of African ancestry. July 12, 2024. Temple University Libraries, Evidence Synthesis and Systematic Review Service. 3. Citation for and links to publications that cite or use the data: Not available yet 4. Links to other publicly accessible locations of the data: N/A 5. Links/relationships to ancillary or related data sets: 6. Was data derived from another source? No If yes, list source(s): -------------------- DATA & FILE OVERVIEW -------------------- 1. File list (filenames, directory structure (for zipped files) and brief description of all data files): A. Filename: 20240522_Scoping_Genetic_FinalSearchResults.xlsx Short description: Search strategy details only-Contains PRISMA flow diagram counts, search strategies completed on 20240517 B. Filename: 20240522_Scoping_Genetic_Results.csv Short description: Cover sheet of search detail contains data for PRISMA flow diagram or chart [http://prisma-statement.org/prismastatement/flowdiagram.aspx] C. Filename: 20240522_Scoping_Genetic_SearchStrategies.csv Short description: Search Strategies for review including sources: PubMed (NLM), Embase (Elsevier), Web of Science Core Collection (Clarivate Analytics), BIOSIS Citation Index (Clarivate Analytics), and Applied Social Sciences Index and Abstracts (ProQuest) D. Filename: For_Rayyan_Boudeau.txt Short description: deduplicated citation file, is compatible with Rayyan or other citation managers, contains 8,927 citations; 31 grey literature results are not in the Rayyan file 2. Relationship between files, if important for context: For_Rayyan_Boudeau.txt contains all of the citations to deposit into Rayyan or other systematic review screening tools such as Covidence or Abstrackr. Files B and C are contained as tabs in file A and are provided as separate csv files. 3. Additional related data collected that was not included in the current data package: N/A 4. Are there multiple versions of the dataset? yes/no If yes, list versions: No Name of file that was updated: i. Why was the file updated? ii. When was the file updated? Name of file that was updated: i. Why was the file updated? ii. When was the file updated? -------------------------- METHODOLOGICAL INFORMATION -------------------------- 1. Description of methods used for collection/generation of data: To identify studies to include or consider for this scoping review, the review team worked with a librarian (TN) to develop detailed search strategies for each database. The PRISMA-ScR extension was followed for search reporting. The librarian (TN) developed the search for PubMed (NLM) and translated the search for every database searched. The PubMed (NLM) search strategy was reviewed by the research team to check for accuracy and term relevancy. All final searches were peer-reviewed by another librarian following the Peer Review of Electronic Search Strategies (PRESS checklist). The search was limited by date from 2000 to Present and by publication type based on exclusion criteria. The databases included in this search are [list of databases: PubMed (NLM), Embase (Elsevier), Web of Science Core Collection (Clarivate Analytics), BIOSIS Citation Index (Clarivate Analytics), and Applied Social Sciences Index and Abstracts (ProQuest) using a combination of keywords and subject headings. A grey literature search included The National Comprehensive Cancer Network Clinical Practice Guidelines in Oncology (https://www.nccn.org/), Search.bioPreprint (https://www.hsls.pitt.edu/preprint), and Trip Pro Medical Database (https://www.tripdatabase.com). All final searches were performed on May 17, 2024 by the librarian and were fully reported to the research team on May 22, 2024. The full search strategies as reported by the librarian are provided in Appendix(___). They are also archived at [DOI]. A summary of the search results: PubMed (NLM) from 1809 to 5/17/2024 (2,740 Results) Embase (Elsevier) from 1974 to 5/17/2024 (6,607 Results) Web of Science Core Collection (Clarivate Analytics) from 1900 to 5/17/2024 (415 results) BIOSIS Citation Index (Clarivate Analytics)?from inception to 5/17/2024 (658 results) Applied Social Sciences Index & Abstracts (ProQuest)?from inception to 5/17/2024 (69 results) The National Comprehensive Cancer Network Clinical Practice Guidelines in Oncology (https://www.nccn.org/)?from inception to 5/17/2024 (3 results) Search.bioPreprint (https://www.hsls.pitt.edu/preprint)?from inception to 5/17/2024 (28 results) TRIP Pro Medical Database from 1867 to 5/17/2024 from inception to 5/17/2024 (86 results) The search resulted in 10,575 studies. 1,634 duplicate studies were found and omitted by the librarian [TN] using EndNote 20 following the Wichor Bramer duplicate identification strategy. This resulted in 8,941 records to screen from databases or websites and 31 records to screen from other methods, resulting in a total of 8,972 records. Studies were screened by title and abstract by two blinded and independent reviewers. If a tiebreaker was needed, a third reviewer was called in. This process was repeated for full text article screening and article selection. 2. Standards and calibration information, if appropriate: The citations can be deposited into a systematic review software for screening and is formatted for importing into Rayyan [https://rayyan.ai] a free screening tool. The file is also compatible with the Covidence (requires a subscription or free trial) [https://www.covidence.org/] and Abstrackr (free) [http://abstrackr.cebm.brown.edu/] systematic review screening tools. 3. Describe any quality-assurance procedures performed on the data: N/A 4. People involved with sample collection, processing, analysis and/or submission: Travis Nace, MSLIS, Temple University Libraries-conducted searches, deduplication of records, compilation of search records and reporting. 覧覧覧覧覧覧覧覧覧覧 DATA-SPECIFIC INFORMATION FOR: For_Rayyan_Boudeau.txt 覧覧覧覧覧覧覧覧覧覧 1. Number of databases searched: 5 databases, 3 grey literature sources 2. Number of citations: Rayyan file contains 8,972 citations from databases (after deduplication via Endnote 20), does not include the 31 citations from grey literature. 3. Specialized formats or other abbreviations used: File is compatible to import to Rayyan and citation manager tools